Biotin-PEG4-propionic acid

 CAS No.: 721431-18-1  Cat No.: BP-500900  Purity: >97% 4.5  

Biotin-PEG4-propionic acid is a heterobifunctional linker built from a biotin moiety connected through a polyethylene glycol spacer to a propionic acid terminus. Structurally, it provides a flexible, hydrophilic PEG4 chain that reduces steric hindrance and improves solubility, while the biotin group enables strong, high-affinity capture by streptavidin or avidin for modular assembly. The terminal propionic acid offers a carboxyl handle suitable for coupling reactions (e.g., amide bond formation) to attach the linker to proteins, peptides, or other PROTAC components, thereby generating constructs with controlled spatial presentation. In PROTAC and targeted protein degradation research, such linkers are valuable for tethering degraders or recruiting/immobilizing components on streptavidin-based platforms, facilitating multivalent binding, assay development, and purification workflows. Overall, it supports robust experimental design where conjugation efficiency and linker flexibility are critical for reliable degradation studies.

Biotin-PEG4-propionic acid

Structure of 721431-18-1

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Category
PROTAC Linker
Molecular Formula
C21H37N3O8S
Molecular Weight
491.60
Appearance
White powder

* For research and manufacturing use only. Not for human or clinical use.

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Purity
>97%
Appearance
White powder
Storage
Powder, -20°C, 3 years; 4°C, 2 years; In solvent, -80°C, 6 months; -20°C, 1 month
Shipping
Room temperature in continental US; may vary elsewhere.
IUPACName
3-[2-[2-[2-[2-[5-[(3aS,4S,6aR)-2-oxo-1,3,3a,4,6,6a-hexahydrothieno[3,4-d]imidazol-4-yl]pentanoylamino]ethoxy]ethoxy]ethoxy]ethoxy]propanoic acid
Synonyms
3-[2-[2-[2-[2-[[5-[(3aS,4S,6aR)-2-oxo-1,3,3a,4,6,6a-hexahydrothieno[3,4-d]imidazol-4-yl]-1-oxopentyl]amino]ethoxy]ethoxy]ethoxy]ethoxy]propanoic acid; 3-[2-[2-[2-[2-[5-[(3aS,4S,6aR)-2-oxo-1,3,3a,4,6,6a-hexahydrothieno[3,4-d]imidazol-4-yl]pentanoylamino]ethoxy]ethoxy]ethoxy]ethoxy]propanoic acid
Boiling Point
784.8±60.0 °C at 760 mmHg
Density
1.2±0.1 g/cm3
InChI Key
GYOXFFWLRKVJJX-ZWOKBUDYSA-N
InChI
InChI=1S/C21H37N3O8S/c25-18(4-2-1-3-17-20-16(15-33-17)23-21(28)24-20)22-6-8-30-10-12-32-14-13-31-11-9-29-7-5-19(26)27/h16-17,20H,1-15H2,(H,22,25)(H,26,27)(H2,23,24,28)/t16-,17-,20-/m0/s1
SMILES
C1C2C(C(S1)CCCCC(=O)NCCOCCOCCOCCOCCC(=O)O)NC(=O)N2

Biotin-PEG4-propionic acid is a versatile PROTAC linker building block that combines a biotin recognition handle with a hydrophilic polyethylene glycol spacer and a carboxylic acid for controlled conjugation. Its flexible, water-compatible architecture supports efficient tethering and can improve solubility and bioconjugation performance in targeted protein degradation workflows. The following sections describe its structure and practical reactivity considerations in detail.

Structure: The linker features a biotin moiety connected through a polyethylene glycol spacer to a terminal propionic acid functionality. It contains amide and ether linkages typical of PEG-based conjugates, with multiple heteroatoms that enable hydrogen bonding. The resulting molecule is generally water-compatible and conformationally flexible.

Reactivity: The terminal carboxylic acid is suitable for standard PROTAC assembly strategies that form amide or ester bonds with complementary nucleophiles on warheads or E3 ligands. Common approaches include activation of the acid using carbodiimide coupling systems and subsequent reaction with amine-bearing partners under mild, aqueous or mixed-solvent conditions. Reaction efficiency is typically improved by controlling pH and minimizing hydrolysis of activated intermediates.

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* Our calculator is based on the following equation:
Concentration (start) x Volume (start) = Concentration (final) x Volume (final)
It is commonly abbreviated as: C1V1 = C2V2

* Total Molecular Weight:
g/mol
Tip: Chemical formula is case sensitive. C22H30N4O c22h30n40
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