Bromo-PEG3-bromide is a heterobifunctional, short-chain polyethylene glycol (PEG) linker bearing terminal bromides, providing a flexible, hydrophilic spacer with two chemically addressable leaving groups for stepwise conjugation. Structurally, it consists of a PEG3 backbone terminated by bromomethyl functionalities, enabling nucleophilic substitution reactions with appropriate partners such as amines, thiols, or alcohol-derived nucleophiles to install the linker onto targeting ligands and/or E3 ligase-binding moieties. In PROTAC architectures, such PEG linkers help tune the effective distance, conformational mobility, and solvation of the ternary complex, which can be critical for productive recruitment and ubiquitination of the target protein. As a versatile building block, it supports the modular synthesis of degradation constructs and facilitates systematic structure–activity studies by varying attachment chemistry and linker placement, thereby improving experimental access to optimized targeted protein degradation reagents.
Structure of 31255-26-2
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Bromo-PEG3-bromide is a PEG-based bifunctional linker designed for constructing PROTACs through robust electrophile–nucleophile coupling. Its ether-rich, flexible polyether segment helps maintain linker solubility and conformational adaptability, which can improve conjugation efficiency and accessibility of the recruited ligands in targeted protein degradation workflows. The molecule will be described in detail below, including its structural features and practical reactivity considerations for PROTAC assembly.
Structure: The linker contains a short poly(ethylene glycol) chain terminated by bromides, providing two alkyl bromide electrophiles. Its structure features ether linkages that impart flexibility and polarity, while the carbon–bromine bonds enable nucleophilic substitution. The resulting material is generally compatible with polar organic synthesis conditions.
Reactivity: Bromo-PEG3-bromide is suitable for PROTAC synthesis via alkylation of nucleophiles, most commonly through SN2-type substitution of bromide by amines or other nucleophilic heteroatoms. Reactions are typically performed under anhydrous, base-mediated conditions using polar aprotic solvents to promote substitution and minimize side reactions. No special catalysts are required beyond standard coupling bases; careful stoichiometry and temperature control help drive selective mono- or di-functional conjugation.
* Our calculator is based on the following equation:
Concentration (start) x Volume (start) = Concentration (final) x Volume (final)
It is commonly abbreviated as: C1V1 = C2V2
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